HORDB

ID: hor001387
Uniprot ID: A0A423TEB2
Protein name: FMRFamide-related peptide
Gene name: NA
Organism: Penaeus vannamei (Whiteleg shrimp) (Litopenaeus vannamei)
Family: FARP (FMRFamide related peptide) family
Source: animal
Expression: NA
Disease: NA
Comments: NA
Taxonomy: Penaeus (genus), Penaeidae (family), Penaeoidea (superfamily), Dendrobranchiata (suborder), Decapoda (order), Eucarida (superorder), Eumalacostraca (subclass), Malacostraca (class), Multicrustacea (superclass), Crustacea (subphylum), Pancrustacea, Mandibulata, Arthropoda (phylum), Panarthropoda, Ecdysozoa, Protostomia, Bilateria, Eumetazoa, Metazoa (kingdom), Opisthokonta, Eukaryota (superkingdom), cellular organisms
GO MF: NA
GO BP: GO:0007218 neuropeptide signaling pathway
GO CC: GO:0005576 extracellular region

Sequence: NRNFLRF
Length: 7
Propeptide: MFFAVWTLIAVITCSHYARSSPVPPVVGALEPSSQDFAQGQDDAFASPDKRLLKFGRGDEKRGDRNFLRFGRGDAAMDKRNRNFLRFGRGPNRNYIRFGRSDLAPLEFGLGLPEEELPVIIDHGDIDEMFEAFKQEKKNARNSIRHRRSVDRQLSSFCDNCDDSQKPQQTTTAQPAAHPAAAVAAVTRPKRSEAEAKDALSLQRSKRYVVPNYYGYSSYSMNHSPAAWAKMIPAEDLELEEEPQVLSKRAFNVLSGPSEFVGSPSIPEGKMLVKQYPRIVRAPERNFLRFG
Signal peptide: MFFAVWTLIAVITCSHYARS
Modification: NA
Glycosylation: NA
Mutagenesis: NA

Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)

hor001387_AF2.pdb

hor001387_ESM.pdb

Mass:	107330	Formula:	C44H67N15O10
Absent amino acids:	ACDEGHIKMPQSTVWY	Common amino acids:	FNR
pI:	12.5	Basic residues:	2
Polar residues:	2	Hydrophobic residues:	3
Hydrophobicity:	-94.29	Boman Index:	-3224
Half-Life:	1.4 hour	Half-Life Yeast:	3 min
Half-Life E.Coli:	>10 hour	Aliphatic Index	55.71
Instability Index:	3224.29	Extinction Coefficient cystines:	0
Absorbance 280nm:	0

PubMed ID: 19852991
Title: Combining in Silico Transcriptome Mining and Biological Mass Spectrometry for Neuropeptide Discovery in the Pacific White Shrimp Litopenaeus Vannamei